Named Entity Recognition Ner On Ncbi Disease

評価指標

評価結果

このベンチマークにおける各モデルのパフォーマンス結果

モデル名	F1	Paper Title	Repository
SciFive-Base	89.39	SciFive: a text-to-text transformer model for biomedical literature
BLSTM-CNN-Char (SparkNLP)	89.13	Biomedical Named Entity Recognition at Scale	-
GoLLIE	86.5	GoLLIE: Annotation Guidelines improve Zero-Shot Information-Extraction
BioMobileBERT	87.21	On the Effectiveness of Compact Biomedical Transformers
BioBERT	89.71	BioBERT: a pre-trained biomedical language representation model for biomedical text mining
CL-KL	88.96	Improving Named Entity Recognition by External Context Retrieving and Cooperative Learning
BioLinkBERT (large)	88.76	LinkBERT: Pretraining Language Models with Document Links
BERN2	88.6	BERN2: an advanced neural biomedical named entity recognition and normalization tool
DistilBioBERT	87.93	On the Effectiveness of Compact Biomedical Transformers
PubMedBERT uncased	87.82	Domain-Specific Language Model Pretraining for Biomedical Natural Language Processing
BERT-CRF	84.5	Focusing on Potential Named Entities During Active Label Acquisition
BioMegatron BERT-cased	87.8	BioMegatron: Larger Biomedical Domain Language Model
SciBERT (Base Vocab)	86.88	SciBERT: A Pretrained Language Model for Scientific Text
NuNER Zero Span	61.1	NuNER: Entity Recognition Encoder Pre-training via LLM-Annotated Data
SpanModel + SequenceLabelingModel	89.6	Comparing and combining some popular NER approaches on Biomedical tasks
GPT-4	-	Evaluation of large language model performance on the Biomedical Language Understanding and Reasoning Benchmark	-
KeBioLM	89.1	Improving Biomedical Pretrained Language Models with Knowledge
BERN	88.3	A Neural Named Entity Recognition and Multi-Type Normalization Tool for Biomedical Text Mining
CompactBioBERT	88.67	On the Effectiveness of Compact Biomedical Transformers
STM	88.6	Learning A Unified Named Entity Tagger From Multiple Partially Annotated Corpora For Efficient Adaptation

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