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Nested Named Entity Recognition On Genia

Metrics

F1

Results

Performance results of various models on this benchmark

Model Name
F1
Paper TitleRepository
Triaffine + BioBERT81.23Fusing Heterogeneous Factors with Triaffine Mechanism for Nested Named Entity Recognition-
CNN-NER81.40An Embarrassingly Easy but Strong Baseline for Nested Named Entity Recognition
SpanModel + SequenceLabelingModel78.3Comparing and combining some popular NER approaches on Biomedical tasks
Anchor-Region Networks74.8Sequence-to-Nuggets: Nested Entity Mention Detection via Anchor-Region Networks
Sequence-to-Set80.44A Sequence-to-Set Network for Nested Named Entity Recognition
BINDER80.5Optimizing Bi-Encoder for Named Entity Recognition via Contrastive Learning
seq2seq+BERT+Flair78.31Neural Architectures for Nested NER through Linearization
W2NER81.39Unified Named Entity Recognition as Word-Word Relation Classification
Hashing80.54To be Continuous, or to be Discrete, Those are Bits of Questions
LogSumExpDecoder78.93Nested Named Entity Recognition via Explicitly Excluding the Influence of the Best Path
Pyramid77.78Pyramid: A Layered Model for Nested Named Entity Recognition
Second-best learning and decoding + BERT77.05Nested Named Entity Recognition via Second-best Sequence Learning and Decoding
BARTNER79.23A Unified Generative Framework for Various NER Subtasks
Pyramid + BERT79.19Pyramid: A Layered Model for Nested Named Entity Recognition
Second-best learning and decoding77.19Nested Named Entity Recognition via Second-best Sequence Learning and Decoding
Neural layered model74.7A Neural Layered Model for Nested Named Entity Recognition
BioBART79.93BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model
BiFlaG76.0Bipartite Flat-Graph Network for Nested Named Entity Recognition
Boundary-aware neural model74.7A Boundary-aware Neural Model for Nested Named Entity Recognition
Neural segmental hypergraphs75.1Neural Segmental Hypergraphs for Overlapping Mention Recognition
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