HyperAI

PDB Protein Structure Dataset (global Version)

Date

2 years ago

Size

27.45 MB

Organization

Kaggle

Publish URL

www.kaggle.com

License

其他

The PDB protein structure data set is a database that specifically collects three-dimensional structural information of proteins and nucleic acids. It has a very long history and was first constructed and collected by Walter Hamilton of the Brookhaven National Laboratory in the United States in 1971.

The information in the PDB database mainly includes: protein/nucleic acid source, protein/nucleic acid molecular composition, atomic coordinates, experimental methods used to determine the structure, as well as other data and information such as temperature factors and structure determiners. The PDB database can be used to search for the structure of ribosomes, oncogenes, drug targets, and even entire viruses.

  • Release time:1971
  • Publishing Agency:wwPDB
  • Quantity included:140,000 protein/nucleic acid structures
  • Data format:CSV file
  • Data size:27 MB

PDB complete dataset download:

https://www.rcsb.org/#Category-download

PDB Dataset Visualization Tool Swiss PDB viewer: The file can be viewed directly with a text editor, but it is better to use a visualization tool

https://spdbv.vital-it.ch/disclaim.html#

wwPDB.torrent
Seeding 2Downloading 0Completed 1,051Total Downloads 1,639
  • wwPDB/
    • README.md
      1.55 KB
    • README.txt
      3.1 KB
    • data.zip
      27.45 MB